Download PGAP's HMM database from NCBI.

Usage:

usage: pynteny download [-h] [args] 

Arguments

short	long	default	help
-h	--help		show this help message and exit
-o	--outdir	None	path to the directory where to download HMM database.
-u	--unpack		unpack originally compressed database files
-f	--force		force-download database again if already downloaded.
-l	--log	None	path to log file. Log not written by default.

Description

download the latest version of the NCBI Prokaryotic Genome Annotation Pipeline (PGAP) HMM database. Users may provide their own HMM database in the search subcommand.